14:39

Free energy calculation by LIE Method using BFEER

04:46

Download and install BFEER on your PC

11:54

Performing MMPBSA using VMD Plugin BFEER

01:29:47

Day5: Cluster analysis 2, MMPBSA, Linear Interaction Energy (LIE) Free energy estimation

46:47

Day4: Cluster Analysis part 1 (shifting from NAMD to Gromacs)

02:13:54

Day3: Trajectory formatting, analysis (RMSD, RMSF, RG, Hydrogen bonding, salt bridges) and Movies

01:29:26

Day2: Protein ligand simulation (parameterization, setting up and running the simulation)

02:34:03

Day1: NAMD installation, setting up and Running protein in water simulation

35:09

Performing MD simulations on cloud platform - Google Colab and NAMD

16:54

AutoDock Parser- A tool for processing AutoDock output files

01:06:09

Practical 1 Intro to Systems Biology

17:10

T Coffee and DALIGN-2

57:58

T Coffee and DALIGN-1

50:19

Interpro 1

44:12

Interpro 2

01:10:07

Med chem lecture 9 Scoring functions and limitations

30:31

Med Chem Lecture 8

42:06

Med Chem Lecture 7

39:08

Med Chem Lecture 6

30:27

Med Chem Lecture 5

48:36

Med chem Lecture 4

56:30

Med chem Lecture 3

58:12

Med Chem lecture 2

01:08:37

Med chem Lecture 1

23:59

Malaria 3- Control measures of Malaria

53:58

Malaria 2- Erythrocytic Schizogony and stages in mosquito

01:08:43

Malaria 1- Exoerythrocytic Cycle

52:39

Clustering Algorithms in phylogeny -WPGMA

01:12:33

Testing Additive And Ultrametric Trees

38:38

Ab initio Structure Prediction 3

49:35

Ab initio Structure Prediction 2

42:42

Ab initio Structure Prediction 1

01:46:55

RNA structure prediction- nussinov jacobson algorithm

21:20

RNA structure Prediction Practical Demo

56:07

Selecting the best evolutionary model for your sequence data

58:48

Evolutionary models in nucleotide substitution

58:11

Observed Distances and Evolutionary Distances

18:43

Download Install and Use Gromacs on Windows

01:33:32

Phylogeny 3 Demo on the Phylogenetic Reconstructions

52:36

Phylogeny 2 Tree Reconstruction Methods

36:51

Phylogeny 1 Basic terminologies

42:34

Multiple Sequence alignment 2

44:35

Multiple Sequence Alignments 1

49:52

Lecture 7 RMS Fit of conformers 2

56:03

Lecture 6 RMS Fit of Conformers 1

57:00

Lecture 4 Mapping properties onto the surface

01:07:22

Lecture 3 Protein Structure Visualization Hydrogen bonds and types

01:19:07

Lecture 2 PDB Flat file Format

57:00

Practical 9 Analyzing surface of the protein

48:41

Practical 8 Identifying apolar interactions and salt bridges

40:18

Practical 7 Performing “In Silico” Mutagenesis in protein structure and analyzing Side chain conform

01:01:53

Practical 6 Fitting monomers or Building up Symmetry

40:34

Practical 5 Comparing Conformations Deoxyhemoglobin AND Oxyhemoglobin

01:12:16

Practical 4 Basic Exercise in protein structure visualization Part 2

01:36:55

Practical 3 Basic Exercise in protein structure visualization Part 1

01:19:07

Practical 2 PDB Flat file Format

01:02:01

Practical 1 Basic Orientation on Protein Structures

46:30

Practical Demo on Workflows in Bioinformatics

14:04

Workflows in Bioinformatics 2: Known workflow environments

15:25

Workflows in Bioinformatics 1: An introduction