T-Bioinfo Server Tutorials
42 videos • 595 views • by OmicsLogic
1
RNA-Seq Practical : From NGS expression table to statistical analysis on T-Bioinfo Server
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2
T-BioInfo - Using FTP and SVL files - Pine Biotech
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3
Differential Gene Expression on T-Bioinfo Server
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4
Annotation & Pathways analysis on T-Bioinfo Server
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5
Cell line Data and Preparation on T-Bioinfo Server
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6
Quantile Normalization on T-Bioinfo Server
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7
Unsupervised Machine Learning (Hierarchical Clustering)
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8
Unsupervised Machine Learning: K Mean Clustering on T-Bioinfo platform
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9
Supervised Machine Learning(Decision Tree and Random Forest)
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10
Supervised Machine Learning (Support Vector Machine (SVM)) on T-Bioinfo Platform
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11
Supervised Machine Learning: Feature Selection Methods: swLDA and RF on T-Bioinfo Platform
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12
What is Genomics Variation in NGS Data | Pine Biotech
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13
Phylogenetic Analysis on T-Bioinfo Server - No coding needed!
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14
Tutorial on "Mutability Data Analysis" on T - Bioinfo Server
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15
Tutorial on Differential Mutation Analysis on T - Bioinfo Platform
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16
Analysis of 16s “Amplicon” Data using DADA2 Pipeline on T-Bioinfo Server
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17
16S Metagenomics/Microbiome Pipeline on T-Bioinfo Server
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18
Analysis of 16s “Amplicon” Data using DADA2 Pipeline on T-Bioinfo Server - By Laura Murray
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19
Analysis of 16S rRNA metataxonomics data on T-Bioinfo Server - QIIME2
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20
Spatially Resolved Transcriptomics on T-Bioinfo Server
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21
Breast Cancer Case Study: Oncogene Variant Calling Analysis
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22
T-BioInfo: A big data analysis platform for Omics data - Clustering Dashboard Example
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23
T-BioInfo platform for processing, analysis and visualization of complex omics data (i.e. genomics)
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24
Ebolavirus: Deadly Mutations
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25
Principal Component Analysis: LIHC
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26
Factor Regression Analysis: LIHC
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27
Patient Derived Xenograft Models
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28
Changing Immune Response in Cancer
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29
Surveillance of SARS-COV-2 VOC
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30
Modeling Cancer Precision Medicine: Supervised Analysis
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31
Modeling Cancer Precision Medicine: Unsupervised Analysis
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32
Differentially Expressed Genes in Alzheimers
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33
EV-D68 and Acute flaccid myelitis in Kids
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34
Bulk RNA-Seq Analysis: Processing FASTQ files using Trimmomatic, Bowtie2-t, RSEM (Output Overview)
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35
Bulk RNA Seq Data Analysis: Mapping with Bowtie2 & Generating Expression Table with RSEM
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36
Bulk RNA-Seq Data Analysis: Mapping with HiSat2 and Quantification with HTSeq (Output Overview)
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37
Bulk RNA-Seq Data Analysis: Mapping with HiSat2 & Quantification with HTseq (Setting up Pipeline)
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38
Differential Gene Expression: Bulk RNA Seq Analysis Results (DESEQ2 Output Review)
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39
Differential Gene Expression: Bulk RNA Seq with DESEQ2 on the T-BioInfo Platform (Getting Started)
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40
Differential Gene Expression Gene Enrichment Analysis (Output Review)
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41
Differential Gene Expression Analysis: Gene-set Enrichment Analysis (GSEA) (Setting Up Pipeline)
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42
Using the T-BioInfo Dashboard to Explore Microbiome Datasets
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